Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015914675.1_cds_XP_016464639.1_57661
CDS Infomation

[gene=LOC107787563] [db_xref=GeneID:107787563] [protein=polyphenol oxidase E, chloroplastic-like] [protein_id=XP_016464639.1] [location=join(41564..43013,43244..43599)] [gbkey=CDS]
Sequence

ATGGCGTCAAGTGTTATTCCACCAGTGTGCAATAGCACAACAGTCAAAACTCCCTTTACT
TCAACCACCAAGTCTTCTTCTTTAGCTTCCACTCCAAAACCCTCTCAACTTTTCCTCCGT
GGAAAACGTAACCACAGCTTCAAAGTCTCATGCAAGGTCTCCAATGGTGATGAAAACCAA
AGTGTTGAAACAAATAATTCTGTTGATAGGAGAAATGTGCTTCTAGGTTTAGGAGGTCTA
TATGGTGCTGCTAATGTTGTACCATTGGCTTCAGCCACTCCCATTCCAGCCCCTACTACT
TCATGTAGCAAGACTGGTGCCACAATTAAACCCGGTTTACCAGTACCTTATTCTTGTTGT
CCCCCTCCGCTAAAAATTGATCCTAAGGATATTCCTCATTACACGTTTCCAACAGGATCG
AAGCTCCGTATTCGACCAGCTTCTCATGCCGTGGATGAAGAGTACATGGCTAAGTACAAC
TTAGCCATTACTAAAATGAAGGAGCTCGACGTCACTGATCCAGATGATCCACGTGGGTTC
GCGGCGCAAGCCAAAATCCACTGTGCTTATTGCAACGGTGCATACACCGTTGCTGGCAAA
GAGCTACAAATTCACTTCTCGTGGCTTTTTTTCCCATTCCATAGATGGTACTTGTACTTC
TATGAGAGAATCTTGGGTTCTTTAATCAATGATCCTACTTTTGGTTTGCCATATTGGAAC
TGGGATCATCCAAAGGGCATGCGTTTGCCACACATGTTTGATCAACCAAATGTGTACCCT
GATCTTTACGATCCAAGACGTAACCAAGAGCACCGTGGTTCGGTAATCATGGACCTTGGT
CATTTTGGTCAAGACGTGAAAGGAACTGACTTACAAATGATGAGAAATAACCTTACTCTA
ATGTATCGTCAAATGATTACCAATTCACCGTGTCCACAACTGTTTTTTGGTAAGCCATAT
TGTACGGAAGTTGGACCCAAACCAGGGCAGGGAGCTATTGAAAACATCCCTCATACTCCT
GTCCACATTTGGGTTGGTAGTAAGCCTAATGAGAATAACTGTAAAAACGGTGAAGATATG
GGAAATTTCTATTCAGCTGGTAAGGATCCTGCTTTCTATAGTCACCATGCAAATGTAGAT
CGCATGTGGACAATATGGAAAACATTAGGAGGAAAACGCAAGGACATCAACAAGCCAGAT
TATTTGAACAGTGAGTTCTTCTTCTACGACGAAAAGAAAAACCCTTTTCTCGTGAAAGTC
CGTGACTGTTTGGACAATAAGAAAATGGGATATGATTTCCAAGCAATGCCAACCCCATGG
CGCAATTTTAAGCCATTGAAGAAGAGCAAGAGCAAGGTCAATGCACGTTCAGTTCCTCCA
GTTACCCAAACATTCCCTATTGCAAAGATTGACAAAGCCATAACATTTTCCATCAAAAGG
GAAACTTCAGGCCGGACTCAGCAGGAGAAAGACGCAGAAGAGGAGATGTTAACTTTCTTG
GAACTGAACATCGATCAGCGAAAGCACATAAGGTTTGATGTGTTCATTAACGCAGATGCA
AACTCCAACTGGTATGAGCTAGACAGGGCAGAGTTTGCAGGAAGTTACACTGCCTTGCCT
CATGTTCATTCAGATCCCACTAAACCACATGTCGCCCCTATTGCAAAATTCCAGCTGGCC
ATTACCGAGTTGCTCGAGGAAATTGGCCTTGAAGATGAAGATGATATAGTGGTGACTCTG
GTCCCGAAAACTGGGGGCGAATTTGTCGCCATTAAATCTGCTGTGATTACACTTGAAGCT
TGTTGA

Peptide Sequence

PEP ID

XP_016464639.1
PEP Infomation

PREDICTED: polyphenol oxidase E, chloroplastic-like [Nicotiana tabacum]
Sequence

MASSVIPPVCNSTTVKTPFTSTTKSSSLASTPKPSQLFLRGKRNHSFKVSCKVSNGDENQ
SVETNNSVDRRNVLLGLGGLYGAANVVPLASATPIPAPTTSCSKTGATIKPGLPVPYSCC
PPPLKIDPKDIPHYTFPTGSKLRIRPASHAVDEEYMAKYNLAITKMKELDVTDPDDPRGF
AAQAKIHCAYCNGAYTVAGKELQIHFSWLFFPFHRWYLYFYERILGSLINDPTFGLPYWN
WDHPKGMRLPHMFDQPNVYPDLYDPRRNQEHRGSVIMDLGHFGQDVKGTDLQMMRNNLTL
MYRQMITNSPCPQLFFGKPYCTEVGPKPGQGAIENIPHTPVHIWVGSKPNENNCKNGEDM
GNFYSAGKDPAFYSHHANVDRMWTIWKTLGGKRKDINKPDYLNSEFFFYDEKKNPFLVKV
RDCLDNKKMGYDFQAMPTPWRNFKPLKKSKSKVNARSVPPVTQTFPIAKIDKAITFSIKR
ETSGRTQQEKDAEEEMLTFLELNIDQRKHIRFDVFINADANSNWYELDRAEFAGSYTALP
HVHSDPTKPHVAPIAKFQLAITELLEEIGLEDEDDIVVTLVPKTGGEFVAIKSAVITLEA
C

Transcript Sequence

Gene sequence data has not been registered.